User:Michael Melbardis/Sandbox 1: Difference between revisions

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==Your Heading Here (maybe something like 'Structure')== 2
== Carboxypeptidase A in ''Bos taurus''==
<StructureSection load='1cpx' size='340' side='right' caption='Carboxypeptidase A' scene=''>
<StructureSection load='1cpx' size='340' side='right' caption='Carboxypeptidase A' scene=''>
This is a default text for your page '''Michael Melbardis/Sandbox 1'''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
This is a default text for your page '''Michael Melbardis/Sandbox 1'''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
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== General Features ==
== General Features ==
=== Secondary Structure ===
=== Role of Zinc Ions ===


== Hydrophobic Binding Pocket ==
== Hydrophobic Binding Pocket ==
A <scene name='75/752354/Trialscene1/1'>hydrophobic binding pocket</scene> anchors the C-terminus of the polypeptide chain in the active site.
=== Specificity of Polypeptide Binding ===


== Role of Tyr248 ==
== Catalytic Mechanism ==
 
=== Role of Tyr248 ===
==== Induced Fit Theory ====


This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.


</StructureSection>
</StructureSection>
== References ==
== References ==
<references/>
<references/>

Latest revision as of 03:11, 1 March 2017

Carboxypeptidase A in Bos taurusCarboxypeptidase A in Bos taurus

This is a default text for your page Michael Melbardis/Sandbox 1. Click above on edit this page to modify. Be careful with the < and > signs.

You may include any references to papers as in: the use of JSmol in Proteopedia [1] or to the article describing Jmol [2] to the rescue.

1CPX, inhibited carboxypeptidase A

Introduction

General Features

Secondary Structure

Role of Zinc Ions

Hydrophobic Binding Pocket

A anchors the C-terminus of the polypeptide chain in the active site.

Specificity of Polypeptide Binding

Catalytic Mechanism

Role of Tyr248

Induced Fit Theory

Carboxypeptidase A

Drag the structure with the mouse to rotate

ReferencesReferences

  1. ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
  2. ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
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