3omd: Difference between revisions

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-{{STRUCTURE_3omd|  PDB=3omd  |  SCENE=  }}
-===Crystal structure of unknown function protein from Leptospirillum rubarum===
-==About this Structure==
+==Crystal structure of unknown function protein from Leptospirillum rubarum==
-[[3omd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Leptospirillum_rubarum Leptospirillum rubarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OMD OCA].
+<StructureSection load='3omd' size='340' side='right' caption='[[3omd]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-[[Category: Leptospirillum rubarum]]
+== Structural highlights ==
-[[Category: Chang, C.]]
+<table><tr><td colspan='2'>[[3omd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"leptospirillum_rubarum"_aliaga_goltsman_et_al._2009 "leptospirillum rubarum" aliaga goltsman et al. 2009]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OMD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3OMD FirstGlance]. <br>
-[[Category: Chen, Z.]]
+</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene></td></tr>
-[[Category: Cui, H.]]
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">UBAL2_82410030 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=419542 "Leptospirillum rubarum" Aliaga Goltsman et al. 2009])</td></tr>
-[[Category: Edwards, A.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3omd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3omd OCA], [http://pdbe.org/3omd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3omd RCSB], [http://www.ebi.ac.uk/pdbsum/3omd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3omd ProSAT]</span></td></tr>
-[[Category: Joachimiak, A.]]
+</table>
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+== Evolutionary Conservation ==
-[[Category: Savchenko, A.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Xu, X.]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/om/3omd_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3omd ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Leptospirillum rubarum aliaga goltsman et al. 2009]]
+[[Category: Chang, C]]
+[[Category: Chen, Z]]
+[[Category: Cui, H]]
+[[Category: Edwards, A]]
+[[Category: Joachimiak, A]]
+[[Category: Structural genomic]]
+[[Category: Savchenko, A]]
+[[Category: Xu, X]]
 [[Category: Mcsg]]
-[[Category: Midwest center for structural genomic]]
+[[Category: PSI, Protein structure initiative]]
-[[Category: Protein structure initiative]]
-[[Category: Psi-2]]
-[[Category: Structural genomic]]
 [[Category: Unknown function]]