Sandbox423: Difference between revisions
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Daniel Peters, | Daniel Peters, | ||
Ishtiaque Rafiyu, | Ishtiaque Rafiyu, | ||
Luke Ruksnaitis -- | Luke Ruksnaitis -- Protein complex with cancer drug Alecensa-Alectinib (4uxl) | ||
'''[[Sandbox Reserved 433|Team 9]]:''' Soo Lim Park, | '''[[Sandbox Reserved 433|Team 9]]:''' Soo Lim Park, | ||
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==Help== | ==Help== | ||
See [[Student Projects for UMass Chemistry 423 Spring 2016|Help]] | See [[Student Projects for UMass Chemistry 423 Spring 2016|Help]] | ||
==Questions & Answers== | ==Questions & Answers== | ||
Here is a place to post new questions and answers for each other about how to do things in Proteopedia. Good tips will be added to the Help section for future classes (above link). | Here is a place to post new questions and answers for each other about how to do things in Proteopedia. Good tips will be added to the Help section for future classes (above link). | ||
There is a recurring problem where sections below an edited section disappear (you can still see them in edit window). Don’t try to insert your scene into the command that loads the initial molecule (which may have caused the rest of the sections not to load). Write some text and then insert green scenes into text. -- Prof Thompson 2/17/16 | |||
Prof Thompson 3/3/16: To highlight part of your molecule and hide the rest | |||
1. always use "replace selection” to be sure you aren’t bringing along some other selection, and also use “hide selection” under representations. | |||
2. Turn on selection halos (under the structure “show selected with halos” - click the ON button). They make it much easier to keep track of what is selected, especially after multiple "invert selection" commands. | |||
For example: | |||
selections: DNA, replace selection | |||
invert current selection (selects all but DNA) | |||
representations: hide selection (hides all but DNA) | |||
selections: invert selection (back to DNA) | |||
representations: backbone, set representation | |||