1v9q: Difference between revisions

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-{{Seed}}
+==Crystal Structure of an Artificial Metalloprotein:Mn(III)(3,3'-Me2-salophen)/apo-A71G Myoglobin==
-[[Image:1v9q.png|left|200px]]
+<StructureSection load='1v9q' size='340' side='right' caption='[[1v9q]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1v9q]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Phycd Phycd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V9Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1V9Q FirstGlance]. <br>
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CZM:N,N-BIS-(2-HYDROXY-3-METHYL-BENZYLIDENE)-BENZENE-1,2-DIAMINE'>CZM</scene>, <scene name='pdbligand=MN3:MANGANESE+(III)+ION'>MN3</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1j3f|1j3f]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1v9q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v9q OCA], [http://pdbe.org/1v9q PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1v9q RCSB], [http://www.ebi.ac.uk/pdbsum/1v9q PDBsum]</span></td></tr>
+</table>
+== Function ==
+[[http://www.uniprot.org/uniprot/MYG_PHYMC MYG_PHYMC]] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v9/1v9q_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1v9q ConSurf].
+<div style="clear:both"></div>
+<div style="background-color:#fffaf0;">
+== Publication Abstract from PubMed ==
+New methods for the synthesis of artificial metalloenzymes are important for the construction of novel biocatalysts and biomaterials. Recently, we reported new methodology for the synthesis of artificial metalloenzymes by reconstituting apo-myoglobin with metal complexes (Ohashi, M. et al., Angew Chem., Int. Ed. 2003, 42, 1005-1008). However, it has been difficult to improve their reactivity, since their crystal structures were not available. In this article, we report the crystal structures of M(III)(Schiff base).apo-A71GMbs (M = Cr and Mn). The structures suggest that the position of the metal complex in apo-Mb is regulated by (i) noncovalent interaction between the ligand and surrounding peptides and (ii) the ligation of the metal ion to proximal histidine (His93). In addition, it is proposed that specific interactions of Ile107 with 3- and 3'-substituent groups on the salen ligand control the location of the Schiff base ligand in the active site. On the basis of these results, we have successfully controlled the enantioselectivity in the sulfoxidation of thioanisole by changing the size of substituents at the 3 and 3' positions. This is the first example of an enantioselective enzymatic reaction regulated by the design of metal complex in the protein active site.
-<!--
+Coordinated design of cofactor and active site structures in development of new protein catalysts.,Ueno T, Koshiyama T, Ohashi M, Kondo K, Kono M, Suzuki A, Yamane T, Watanabe Y J Am Chem Soc. 2005 May 11;127(18):6556-62. PMID:15869276<ref>PMID:15869276</ref>
-The line below this paragraph, containing "STRUCTURE_1v9q", creates the "Structure Box" on the page.
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-or leave the SCENE parameter empty for the default display.
--->
-{{STRUCTURE_1v9q|  PDB=1v9q  |  SCENE=  }}
-===Crystal Structure of an Artificial Metalloprotein:Mn(III)(3,3'-Me2-salophen)/apo-A71G Myoglobin===
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+</div>
+<div class="pdbe-citations 1v9q" style="background-color:#fffaf0;"></div>
+==See Also==
-<!--
+*[[Myoglobin|Myoglobin]]
-The line below this paragraph, {{ABSTRACT_PUBMED_15869276}}, adds the Publication Abstract to the page
+== References ==
-(as it appears on PubMed at http://www.pubmed.gov), where 15869276 is the PubMed ID number.
+<references/>
--->
+__TOC__
-{{ABSTRACT_PUBMED_15869276}}
+</StructureSection>
+[[Category: Phycd]]
-==About this Structure==
+[[Category: Kondo, K]]
-V9Q is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Physeter_catodon Physeter catodon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V9Q OCA].
+[[Category: Kono, M]]
+[[Category: Koshiyama, T]]
-==Reference==
+[[Category: Ohashi, M]]
-Coordinated design of cofactor and active site structures in development of new protein catalysts., Ueno T, Koshiyama T, Ohashi M, Kondo K, Kono M, Suzuki A, Yamane T, Watanabe Y, J Am Chem Soc. 2005 May 11;127(18):6556-62. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15869276 15869276]
+[[Category: Suzuki, A]]
-[[Category: Physeter catodon]]
+[[Category: Ueno, T]]
-[[Category: Single protein]]
+[[Category: Watanabe, Y]]
-[[Category: Kondo, K.]]
+[[Category: Yamane, T]]
-[[Category: Kono, M.]]
-[[Category: Koshiyama, T.]]
-[[Category: Ohashi, M.]]
-[[Category: Suzuki, A.]]
-[[Category: Ueno, T.]]
-[[Category: Watanabe, Y.]]
-[[Category: Yamane, T.]]
 [[Category: Manganese]]
 [[Category: Metalloprotein]]
 [[Category: Myoglobin]]
+[[Category: Oxygen storage-transport complex]]
 [[Category: Salophen]]
 [[Category: Schiff base]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 19:09:30 2008''