2bde: Difference between revisions

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==Crystal Structure of the cytosolic IMP-GMP specific 5'-nucleotidase (lpg0095) from Legionella pneumophila, Northeast Structural Genomics Target LgR1==
[[Image:2bde.png|left|200px]]
<StructureSection load='2bde' size='340' side='right' caption='[[2bde]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
 
== Structural highlights ==
<!--
<table><tr><td colspan='2'>[[2bde]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_33152 Atcc 33152]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BDE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BDE FirstGlance]. <br>
The line below this paragraph, containing "STRUCTURE_2bde", creates the "Structure Box" on the page.
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">3078646 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=446 ATCC 33152])</td></tr>
or leave the SCENE parameter empty for the default display.
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bde FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bde OCA], [http://pdbe.org/2bde PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bde RCSB], [http://www.ebi.ac.uk/pdbsum/2bde PDBsum], [http://www.topsan.org/Proteins/NESGC/2bde TOPSAN]</span></td></tr>
-->
</table>
{{STRUCTURE_2bde|  PDB=2bde  |  SCENE=  }}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
===Crystal Structure of the cytosolic IMP-GMP specific 5'-nucleotidase (lpg0095) from Legionella pneumophila, Northeast Structural Genomics Target LgR1===
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bd/2bde_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
2BDE is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Legionella_pneumophila Legionella pneumophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BDE OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Legionella pneumophila]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
[[Category: Abashidze, M.]]
<div style="clear:both"></div>
[[Category: Acton, T B.]]
__TOC__
[[Category: Conover, K.]]
</StructureSection>
[[Category: Forouhar, F.]]
[[Category: Atcc 33152]]
[[Category: Ho, C K.]]
[[Category: Abashidze, M]]
[[Category: Hunt, J F.]]
[[Category: Acton, T B]]
[[Category: Montelione, G T.]]
[[Category: Conover, K]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Forouhar, F]]
[[Category: Tong, L.]]
[[Category: Ho, C K]]
[[Category: Hunt, J F]]
[[Category: Montelione, G T]]
[[Category: Structural genomic]]
[[Category: Tong, L]]
[[Category: Alpha beta protein]]
[[Category: Alpha beta protein]]
[[Category: Dna binding protein]]
[[Category: Nesg]]
[[Category: Nesg]]
[[Category: Northeast structural genomics consortium]]
[[Category: PSI, Protein structure initiative]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 20:33:21 2008''

Latest revision as of 15:47, 11 September 2015

Crystal Structure of the cytosolic IMP-GMP specific 5'-nucleotidase (lpg0095) from Legionella pneumophila, Northeast Structural Genomics Target LgR1Crystal Structure of the cytosolic IMP-GMP specific 5'-nucleotidase (lpg0095) from Legionella pneumophila, Northeast Structural Genomics Target LgR1

Structural highlights

2bde is a 1 chain structure with sequence from Atcc 33152. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Gene:3078646 (ATCC 33152)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2bde, resolution 2.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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