2bde: Difference between revisions

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-[[Image:2bde.gif|left|200px]]
+==Crystal Structure of the cytosolic IMP-GMP specific 5'-nucleotidase (lpg0095) from Legionella pneumophila, Northeast Structural Genomics Target LgR1==
+<StructureSection load='2bde' size='340' side='right' caption='[[2bde]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
- {{Structure
+== Structural highlights ==
-|PDB= 2bde |SIZE=350|CAPTION= <scene name='initialview01'>2bde</scene>, resolution 2.90&Aring;
+<table><tr><td colspan='2'>[[2bde]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_33152 Atcc 33152]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BDE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BDE FirstGlance]. <br>
-|SITE=
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
+<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-|ACTIVITY=
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">3078646 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=446 ATCC 33152])</td></tr>
-|GENE= 3078646 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=446 Legionella pneumophila])
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bde FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bde OCA], [http://pdbe.org/2bde PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bde RCSB], [http://www.ebi.ac.uk/pdbsum/2bde PDBsum], [http://www.topsan.org/Proteins/NESGC/2bde TOPSAN]</span></td></tr>
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam05761 5_nucleotid]</span>
+</table>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bde FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bde OCA], [http://www.ebi.ac.uk/pdbsum/2bde PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2bde RCSB]</span>
+== Evolutionary Conservation ==
-}}
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
-'''Crystal Structure of the cytosolic IMP-GMP specific 5'-nucleotidase (lpg0095) from Legionella pneumophila, Northeast Structural Genomics Target LgR1'''
+  <jmolCheckbox>
+    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bd/2bde_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-==About this Structure==
+    <text>to colour the structure by Evolutionary Conservation</text>
-BDE is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Legionella_pneumophila Legionella pneumophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BDE OCA].
+  </jmolCheckbox>
-[[Category: Legionella pneumophila]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
-[[Category: Single protein]]
+<div style="clear:both"></div>
-[[Category: Abashidze, M.]]
+__TOC__
-[[Category: Acton, T B.]]
+</StructureSection>
-[[Category: Conover, K.]]
+[[Category: Atcc 33152]]
-[[Category: Forouhar, F.]]
+[[Category: Abashidze, M]]
-[[Category: Ho, C K.]]
+[[Category: Acton, T B]]
-[[Category: Hunt, J F.]]
+[[Category: Conover, K]]
-[[Category: Montelione, G T.]]
+[[Category: Forouhar, F]]
-[[Category: NESG, Northeast Structural Genomics Consortium.]]
+[[Category: Ho, C K]]
-[[Category: Tong, L.]]
+[[Category: Hunt, J F]]
-[[Category: alpha beta protein]]
+[[Category: Montelione, G T]]
-[[Category: nesg]]
+[[Category: Structural genomic]]
-[[Category: northeast structural genomics consortium]]
+[[Category: Tong, L]]
-[[Category: protein structure initiative]]
+[[Category: Alpha beta protein]]
-[[Category: psi]]
+[[Category: Dna binding protein]]
-[[Category: structural genomic]]
+[[Category: Nesg]]
+[[Category: PSI, Protein structure initiative]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:22:18 2008''