User:Jaime Prilusky/Evolutionary Trace: Difference between revisions
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Evolutionary Trace
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This is a test page to test evolutionary coloring generated by the [http://mammoth.bcm.tmc.edu/uet/index.html Evolutionary Trace] server at Baylor College of Medicine. | This is a test page to test evolutionary coloring generated by the [http://mammoth.bcm.tmc.edu/uet/index.html Evolutionary Trace] server at Baylor College of Medicine. | ||
<table ><tr> | <table ><tr><td colspan='3'> | ||
<jmol> | |||
<jmolCheckbox> | |||
<target>jmol_1a09</target> | |||
<scriptWhenChecked>set syncMouse on;set syncScript on;sync * on;</scriptWhenChecked> | |||
<scriptWhenUnchecked>sync * off;</scriptWhenUnchecked> | |||
<text>Synchronize the 3 models for rotation with your mouse.</text> | |||
</jmolCheckbox> | |||
</jmol> | |||
</td></tr><tr> | |||
<td> | <td> | ||
<jmol><jmolApplet> | <jmol><jmolApplet> | ||
<title>1a09</title> | <title>1a09</title> | ||
<name>jmol_1a09</name> | |||
<color>white</color><size>300</size> | <color>white</color><size>300</size> | ||
<script>load =1A09;frank off;load /wiki/extensions/Proteopedia/spt/initialview01.spt;spin off;</script> | <script>load =1A09;frank off;load /wiki/extensions/Proteopedia/spt/initialview01.spt;spin off;</script> | ||
| Line 19: | Line 28: | ||
<jmol><jmolApplet> | <jmol><jmolApplet> | ||
<title>Consurf 1a09</title> | <title>Consurf 1a09</title> | ||
<name>jmol_consurf</name> | |||
<color>white</color><size>300</size> | <color>white</color><size>300</size> | ||
<script>load =1A09;frank off;load /wiki/extensions/Proteopedia/spt/initialview01.spt;spin off;select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a0/1a09_consurf.spt"</script> | <script>load =1A09;frank off;load /wiki/extensions/Proteopedia/spt/initialview01.spt;spin off;select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a0/1a09_consurf.spt"</script> | ||
<pspeed>8</pspeed> | <pspeed>8</pspeed> | ||
<caption> | <caption>Consurf coloring</caption> | ||
<controls>spin popup</controls> | <controls>spin popup</controls> | ||
</jmolApplet> | </jmolApplet> | ||
| Line 31: | Line 41: | ||
<jmol><jmolApplet> | <jmol><jmolApplet> | ||
<title>ET 1a09</title> | <title>ET 1a09</title> | ||
<name>jmol_ET</name> | |||
<color>white</color><size>300</size> | <color>white</color><size>300</size> | ||
<script>load =1A09;frank off;load /wiki/extensions/Proteopedia/spt/initialview01.spt;spin off;script "/wiki/ettest/1a09_ETlevels_Jmol.txt";script "/wiki/ettest/ET_coloringscript_Jmol.txt"</script> | <script>load =1A09;frank off;load /wiki/extensions/Proteopedia/spt/initialview01.spt;spin off;select all and not water;dots;spacefill;script "/wiki/ettest/1a09_ETlevels_Jmol.txt";script "/wiki/ettest/ET_coloringscript_Jmol.txt";</script> | ||
<pspeed>8</pspeed> | <pspeed>8</pspeed> | ||
<caption> | <caption>Evolutionary Trace coloring</caption> | ||
<controls>spin popup</controls> | <controls>spin popup</controls>0 | ||
</jmolApplet></jmol> | </jmolApplet></jmol> | ||
</td></tr> | </td></tr> | ||
| Line 44: | Line 55: | ||
<td>[[Image:Scale pyetv.png|300px]]</td></tr> | <td>[[Image:Scale pyetv.png|300px]]</td></tr> | ||
</table> | </table> | ||
Latest revision as of 15:14, 28 June 2015
Evolutionary TraceEvolutionary Trace
This is a test page to test evolutionary coloring generated by the Evolutionary Trace server at Baylor College of Medicine.
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