@@ Line 1: / Line 1: @@
+<StructureSection load="1rta" size="400" color=""  spin="on" Scene=  caption='Ribonuclease A (magenta) complex with thymidilic acid DNA tetramer (pink), [[1rta]]' >
+'''Ribonuclease''' (RNase) degrades RNA.  The endonucleases cleave single or double stranded RNA and include RNase III, A, T1 H and P.  Exo-RNases remove terminal nucleotide from the ends of the RNA molecule.  They include RNase II D, T, PH, Polynucleotide Phosphorylase (PNPase) and oligoribonuclease (ORNase). <br />
+*  '''RNase A''' cleaves C or U of single-stranded RNA (ssRNA).<br />
+*  '''RNase BA''' is RNase from ''Bacillus amyloliquefaciens''.<br />
+*  '''RNase D''' degrades 3'-end pre-tRNA.<br />
+*  '''RNase H''' cleaves RNA/DNA double-strand to produce ssDNA.<br />
+*  '''RNase I''' cleaves 3'-end of ssRNA.<br />
+*  '''RNase II''' degrades 3'-end ssRNA.<br />
+*  '''RNase III''' cleaves rRNA.<br />
+*  '''RNase 5''' is known as angiogenin and is a potent stimulator of new blood vessels formation.<br />
+*  '''RNase P''' is a ribozyme.<br />
+*  '''RNase S''' is RNase A cleaved by subtilisin.<br />
+*  '''RNase SA''' is RNase from ''Streptomyces auerofaciens''.<br />
+*  '''RNase T''' is involved in RNA maturation.<br />
+*  '''RNase T1''' cleaves 3'-end G from ssRNA.<br />
+*  '''RNase U2''' cleaves 3'-end A from ssRNA.<br />
+*  '''α-sarcin''' is a cytotoxic RNase which cleaves a phosphodiester bond in a conserved rRNA loop and inactivates the ribosome.<br />
+*  '''oligoribonuclease''' is an exoribonuclease which cleaves 3'-end of viral RNA-DNA hybrid.<br />
+*  '''Polynucleotide phosphorylase''' is a bifunctional enzyme which has exoribonuclease activity.<br />
+*  '''Binase''' is a microbial RNase which cleaves endonucleolyticly ssRNA.<br />
+*  '''Poly(A)-specific RNase''' cleaves exonucleolyticly the poly(A) tail.<br />
+For more details on RNase A see:<br />
+<br />
+*[[RNase A]] <br />
+*[[Ribonuclease A Catalysis]]<br />
+*[[RNase A Oligomers]]<br />
+*[[RNase A NMR]]<br />
+*[[User:R. Jeremy Johnson/RNaseA]]<br />
+*[[RNaseA Nobel Prizes]].<br />
+For RNase B and RNase S see [[RNaseS RNaseB]].
+{{Clear}}
+==Active Site of Ribonuclease A==
+Ribonuclease A cleaves RNA strands by catalyzing a transphosphorylation reaction where the 2'-OH of the ribose sugar attacks the neighboring phosphate, releasing the ribose on the the other side of the phosphate. This structure shows ribonuclease A (in blue) bound to short DNA strand composed of four thymidines (in pink). Ribonuclease binds tightly to DNA, but since DNA is missing the 2'-OH, ribonuclease does not cleave it. <scene name='Goodsell_Sandbox/Ribonuclease_catalytic_site/2'>Three amino acids</scene> are shown that are important for catalysis. The 3' carbon on the DNA is shown in red--it is the site where the 2'-OH is connected in RNA. The two histidines perform the proton transfers that are needed in the reaction, and the lysine stabilizes the intermediate that is formed as the 2'-OH attacks the phosphate. Ribonuclease cleaves RNA strands best next to cytidine and uridine nucleotides--the reason for this may be seen in a <scene name='Goodsell_Sandbox/Ribonuclease_recognition/2'>spacefilling representation</scene>. Notice that the small pyrimidine base is surrounded by protein atoms. A larger purine base would not fit well in this space.<ref>PMID:1429575</ref>
+{{Clear}}
 ==Your Heading Here (maybe something like 'Structure')==
 <StructureSection load='1stp' size='340' side='right' caption='Caption for this structure' scene=''>
@@ Line 13: / Line 50: @@
 </StructureSection>
-==3D structures of rhodopsin==
+==3D structures of ribonuclease==
 Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
 {{#tree:id=OrganizedByTopic|openlevels=0|
-*Rhodopsin (Rn)
+*RNase I
+**[[3mwq]], [[3mx8]], [[3i67]], [[3i6f]], [[3i6h]], [[3i6j]], [[3i7w]], [[3eux]], [[3euy]], [[3euz]], [[3ev0]], [[3ev1]], [[3ev2]], [[3ev3]], [[3ev4]], [[3ev5]], [[3ev6]], [[3dh5]], [[2e3w]], [[2g4w]], [[2g4x]], [[2gbq]], [[2blp]], [[2blz]], [[2jvt]], [[1jvv]], [[1js0]], [[1fs3]], [[1kf2]], [[1kf3]], [[1kf4]], [[1kf5]], [[1kf7]], [[1kf8]], [[1aqp]], [[1a2w]], [[1rnw]], [[1rnz]], [[1rno]], [[1rnq]], [[1rbx]], [[1ssc]], [[3srn]], [[4srn]], [[1srn]], [[5rsa]], [[1afu]], [[1bel]], [[1c0b]], [[1c0c]], [[1lsq]], [[1rat]], [[1rbn]], [[1rha]], [[1rhb]], [[1rnx]], [[1rny]], [[1rsm]], [[1xps]], [[1xpt]], [[2g8q]], [[2rat]], [[3mzq]], [[3mzr]], [[3rat]], [[3rn3]], [[4rat]], [[5rat]], [[6rat]], [[7rat]], [[7rsa]], [[8rat]], [[8rsa]], [[9rat]], [[9rsa]], [[3mwr]], [[4ao1]] - bRNase I pancreatic - bovine<br />
+**[[3a1r]] - bRNase I pancreatic - neutron<br />
+**[[2aas]] - bRNase I pancreatic - NMR<br />
+**[[3i7x]], [[3i7y]], [[3fkz]], [[3fl3]], [[3dh6]], [[3di7]], [[3di8]], [[3di9]], [[3dib]], [[3dic]], [[2oqf]], [[3bcm]], [[3bco]], [[3bcp]], [[2nui]], [[2op2]], [[1ymn]], [[1ymr]],  [[1ymw]], [[2apq]], [[1izp]], [[1izq]], [[1izr]], [[1kh8]], [[1c8w]], [[1eic]], [[1eid]], [[1eie]], [[1dy5]], [[3rsd]], [[3rsk]], [[1ssa]], [[1ssb]], [[1a5p]], [[1a5q]], [[1c9v]], [[1c9x]], [[3rsp]], [[4rsd]], [[3ql1]], [[3ql2]], [[3rh1]], [[3rid]] - bRNase I pancreatic (mutant)<br />
+**[[3lxo]], [[3jw1]], [[3djo]], [[3djp]], [[3djq]], [[3djv]], [[3djx]], [[3dxg]], [[3dxh]], [[2w5g]], [[2w5i]], [[2w5k]], [[2w5l]], [[2w5m]], [[3d6o]], [[3d6p]], [[3d6q]], [[3d7b]], [[3d8y]], [[3d8z]], [[2pca]], [[2g8r]], [[1z6d]], [[1z6s]], [[1u1b]], [[1w4o]], [[1w4p]], [[1w4q]], [[1wbu]], [[1o0f]], [[1jn4]], [[1jvu]], [[1f0v]], [[1ruv]], [[1rnm]], [[1rnn]], [[1rbw]], [[1rca]], [[1rpf]], [[1rpg]], [[1rph]], [[1rnc]], [[1rnd]], [[1rob]], [[1rta]], [[1rtb]], [[1afk]], [[1afl]], [[1eos]], [[1eow]], [[1o0h]], [[1o0m]], [[1o0n]], [[1o0o]], [[1qhc]], [[1rcn]] - bRNase I pancreatic + nucleotide<br />
+**[[1rar]], [[1ras]] - bRNase I pancreatic fluoroscent<br />
+**[[6rsa]] - bRNase I pancreatic + nucleotide - neutron<br />
+**[[3fl0]], [[3fl1]], [[4rsk]] - bRNase I pancreatic (mutant) + nucleotide <br />
+**[[2xog]], [[2xoi]], [[2q4g]], [[1dfj]], [[4g8v]], [[4g8y]], [[4g90]] - bRNase I pancreatic + inhibitor<br />
+**[[2p42]], [[2p43]], [[2p44]], [[2p45]], [[2p46]], [[2p47]], [[2p48]], [[2p49]], [[2p4a]], [[1bzq]], [[3qsk]] - bRNase I + antibody<br />
+**[[3f8g]], [[2e0j]], [[2e0l]], [[2e0m]], [[2e0o]], [[1h8x]], [[1e21]], [[1dza]] - hRNase I pancreatic (mutant) - human<br />
+**[[2k11]] - hRNase I pancreatic - NMR<br />
+**[[1z7x]] - hRNase I pancreatic + inhibitor<br />
+**[[33ljd]], [[3ln8]], [[2vq8]], [[2vq9]] - ZeRNase I - Zebrafish<br />
+**[[2pqx]], [[2pqv]] - EcRNase I - ''Escherichia coli''<br />
+**[[2z70]], [[2ea1]] - EcRNase I + DNA<br />
+**[[3tsr]] - mRNase I + inhibitor<br />
+*RNase II
+**[[2ix0]], [[2id0]] - EcRNase II<br />
+**[[2ix1]] - EcRNase II (mutant)<br />
+**[[1m58]], [[1km8]], [[1km9]] - BuRNase II - Bullfrog<br />
+**[[1bc4]] - BuRNase II - NMR<br />
+**[[1m07]] - BuRNase II + DNA<br />
+**[[2bex]] - hRNase II + RNase inhibitor protein<br />
+**[[2bzz]], [[2c01]], [[2c02]], [[2c05]] - hRNase II + inhibitor<br />
+*RNase III
+**[[2nue]], [[2nuf]], [[2nug]], [[1yyk]], [[1yyw]], [[4m2z]], [[4m30]] - AaRNase III + RNA - ''Aquifex aeolicus''<br />
+**2ez6]], [[1yyo]], [[1yz9]], [[1rc7]] - AaRNase III (mutant) + RNA<br />
+**[[1rc5]], [[1i4s]], [[1jfz]] - AaRNase III N terminal<br />
+**[[1z5f]] - BuRNase III<br />
+**[[2a11]] - MtRNase III - ''Mycobacterium tuberculosis''<br />
+**[[1o0w]] - TmRNase III - ''Thermotoga maritima''<br />
+**[[1t4n]], [[1t4o]] - yRNase III - yeast - NMR<br />
+**[[2lbs]] - yRNase III RNA-binding domain + RNA - NMR<br />
+**[[2lup]], [[4oog]] - yRNase III RNA-binding domain + RNA <br />
+**[[2luq]] - yRNase III RNA-binding domain <br />
+**[[2kb5]] - hRNase III - NMR<br />
+**[[1dyt]], [[1qmt]], [[2khx]] - hRNase III <br />
+**[[1h1h]] - hRNase III + nucleotide<br />
+**[[3n3w]], [[3o2r]] - RNase III nuclease domain - ''Campylobacter jejuni''<br />
+*RNase 4
+**[[1wdy]] - hRNase 4 <br />
+**[[2rnf]], [[1rnf]] - hRNase 4 + nucleotide<br />
+**[[1kvz]] - BuRNase 4 - NMR<br />
+*RNase 5
+**[[1un3]], [[1un4]], [[1un5]], [[1gv7]] - hRNase 5 (mutant)<br />
+**[[1h0d]] - hRNase 5 + antibody<br />
+**[[3lje]] - ZeRNase 5<br />
+*RNase 6
+**[[1oj1]], [[1oj8]] - BuRNase 6 + nucleotide<br />
+*RNase 7
+**[[2hky]] - hRNase 7 - NMR <br />
+*RNase A
+**[[1rra]] - RNase A - rat<br />
+**[[44j5z]], [[4j60]], [[4j61]], [[4j62]], [[4j63]], [[4j64]], [[4j65]], [[4j66]], [[4j67]], [[4j68]], [[4j69]], [[4j6a]], [[4mxf]] - bRNase A <br />
+**[[4k7m]] - bRNase A (mutant)<br />
+**[[2aas]] - bRNase A - NMR<br />
+**[[4kxh]] - hRNase A <br />
+**[[2e33]] - bRNase A + F-box only protein 2<br />
+**[[4l55]] - bRNase A + aziru<br />
+*RNase B
+**[[1rbb]] - bRNase B <br />
+**[[1rbj]] - bRNase B + tetranucleotide <br />
+*RNase BA
+**[[1x1u]], [[1x1x]], [[1x1y]], [[1b27]], [[1b2u]], [[1b3s]], [[1x1w]] - BaRNase BA + barstar (mutant) - ''Bacillus amyloliquefaciens''<br />
+**[[3da7]], [[1brs]], [[1bgs]] - BaRNase BA + barstar <br />
+**[[1b2s]], [[2za4]] - BaRNase BA (mutant) + barstar (mutant) <br />
+**[[1brn]], [[2kf5]], [[2kf6]], [[1rnb]] - BaRNase BA + nucleotide<br />
+**[[3kch]], [[2f4y]], [[2f56]], [[2f5m]], [[2f5w]] - BaRNase BA crosslinked<br />
+**[[2kf3]], [[2kf4]], [[1fw7]], [[1bnr]] - BaRNase BA - NMR<br />
+**[[1yvs]], [[1b2x]], [[1a2p]], [[1bni]], [[1bnj]] - BaRNase BA <br />
+**[[1b20]], [[1b21]], [[1b2z]], [[1bne]], [[1bnf]], [[1bng]], [[1brh]], [[1bri]], [[1brj]], [[1brk]], [[1bns]], [[1brg]], [[1bsa]], [[1bsb]], [[1bsc]], [[1bsd]], [[1bse]], [[1bna]], [[1bao]] - BaRNase BA (mutant)<br />
+*RAase D
+**[[1yt3]] - EcRNase D<br />
+*RNase E
+**[[2vmk]], [[2c4r]], [[2bx2]] - EcRNase E catalytic domain<br />
+**[[1slj]] - EcRNase E S1 domain - NMR<br />
+**[[1smx]], [[1sn8]] - EcRNase E S1 domain <br />
+**[[2vrt]], [[2c0b]] - EcRNase E catalytic domain + RNA<br />
+**[[3h8a]] - EcRNase E recognition domain + enolase<br />
+*RNase F1
+**[[1fus]], [[1fut]] - GfRNase F1 + nucleotide - ''Gibberella fujikuroi''<br />
+**[[1rck]], [[1rci]] - GfRNase F1 - NMR<br />
+*RNase H
+**[[3h7i]], [[3h8s]], [[3h8w]] - T4RNase H (mutant) - Enterobacteria phage T4<br />
+**[[2ihn]] - T4RNase H (mutant) + DNA<br />
+**[[3h8j]], [[1tfr]] - T4RNase H <br />
+**[[4e89]] - RNase H - XMRV<br />
+**[[2rpi]], [[1ril]] - TtRNase H - ''Thermus thermophilus''<br />
+**[[1rbr]], [[1rbs]], [[1rbt]], [[1rbu]], [[1rbv]], [[2rn2]] - EcRNase H <br />
+**[[1lav]], [[1law]], [[1rda]], [[1rdb]], [[1rdc]] - EcRNase H (mutant) <br />
+**[[1jl2]] - EcRNase H/TtRNase H <br />
+**[[3d0p]], [[3ey1]], [[3i8d]] - BhRNase H (mutant) + DNA - ''Bacillus halodurans''<br />
+**[[1zbf]] - BhRNase H (mutant) <br />
+**[[2r7y]], [[2g8f]], [[2g8h]], [[2g8i]], [[2g8k]], [[2g8u]], [[2g8v]], [[2g8w]], [[1zbi]], [[1zbl]], [[3twh]], [[3uld]] - BhRNase H (mutant) + RNA + DNA<br />
+**[[4htu]], [[4hue]], [[4huf]], [[4hug]] - BhRNase H + DNA<br />
+**[[4ibn]] - uRNase H - uncultured<br />
+**[[4h8k]] - uRNase H + RNA + DNA<br />
+*RNase HI
+**[[2qk9]], [[2qkb]], [[2qkk]] - hRNase HI (mutant) + RNA + DNA<br />
+**[[3h08]] - RNase HI - ''Chlorobaculum tepidum''<br />
+**[[3aa2]], [[3aa3]], [[3aa4]], [[3aa5]], [[2yv0]], [[2z1g]], [[2z1h]], [[2z1i]], [[2z1j]], [[1wse]], [[1wsf]], [[1wsg]], [[1wsh]], [[1wsi]], [[1wsj]], [[1jxb]], [[1jl1]], [[1f21]], [[1kva]], [[1kvb]], [[1kvc]], [[1goa]], [[1gob]], [[1goc]] - EcRNase HI (mutant) <br />
+**[[1g15]], [[1rdd]], [[1rnh]] - EcRNase HI <br />
+**[[1rch]] - EcRNase HI - NMR <br />
+**[[2zqb]] - SoRNase HI (mutant) - ''Shewanella oneidensis''<br />
+**[[2e4l]] - SoRNase HI <br />
+**[[3bsu]] - hRNase HI catalytic domain + RNA + DNA<br />
+**[[2ehg]] - RNase HI - ''Sulfolobus tokodaii''<br />
+**[[1qhk]] - yRNase HI N terminal - NMR<br />
+**[[3u3g]] - uRNase HI<br />
+**[[4e19]], [[4nyn]] - RNase HI - ''Halobacterium salinarium''<br />
+*RNase HII
+**[[3p83]] - AfRNase HII + DNA polymerase sliding clamp - ''Archaeoglobus fulgidus''<br />
+**[[1i39]], [[1i3a]] - AfRNase HII <br />
+**[[3puf]], [[3p56]], [[3p5j]] - hRNase HII subunits α+β+γ<br />
+**[[3kio]] - mRNase HII subunits α+β+γ - mouse<br />
+**[[3o3g]] - TmRNase HII + DNA<br />
+**[[3o3f]], [[3o3h]], [[4hht]] - TmRNase HII (mutant) + DNA<br />
+**[[2etj]] - TmRNase HII <br />
+**[[1x1p]], [[1io2]] - TkRNase HII - ''Thermococcus kodakarensis''<br />
+**[[2dfe]], [[2dff]], [[2dfh]] - TkRNase HII (mutant) <br />
+**[[1eke]] - RNase HII - ''Methanocaldococcus jannaschii''<br />
+*RNase HIII
+**[[2d0a]], [[2d0b]], [[2d0c]] - GsRNase HIII - ''Geobacillus stearothermophilus''<br />
+**[[3asm]] - GsRNase HIII (mutant) <br />
+**[[1uax]] - PhRNase HIII - ''Pyrococcus horikoshii'' <br />
+**[[3vn5]] - AaRNase HIII <br />
+*RNase J
+**[[3bk1]] - TtRNase J <br />
+**[[3bk2]] - TtRNase J + nucleotide<br />
+**[[3zq4]] - BsRNase J1 - ''Bacillus subtilis'' <br />
+*RNase L
+**[[4o1o]] - pRNase L + oligoadenylate + CMP - pig <br />
+**[[4o1p]] - pRNase L + oligoadenylate + AMPPNP  <br />
+**[[4oav]] - pRNase L + oligoadenylate + AMPPCP  + RNA<br />
+*RNase LE
+**[[1dix]] - RNase LE - ''Solanum lycopersicum''<br />
+*RNase MAR1
+**[[1xn4]] - RNase MAR1 - ''Leishmania major''<br />
+**[[2b34]] - RNase MAR1 - ''Caenorhabditis elegans''<br />
+*RNase MS
+**[[1rms]], [[1rds]] - RNase MS - ''Aspergillus phoenicis''<br />
+*RNase MC1
+**[[1v9h]], [[1j1f]], [[1j1g]] - McRNase MC1 (mutant) + nucleotide - ''Momordica charantia''<br />
+**[[1ucg]] - McRNase MC1 (mutant) <br />
+**[[1uca]], [[1ucc]], [[1ucd]] - McRNase MC1 + nucleotide <br />
+**[[1bk7]] - McRNase MC1  <br />
+*RNase NT
+**[[1vcz]], [[1vd1]], [[1vd3]] - NgRNase NT + nucleotide - ''Nicotiana glutinosa''<br />
+**[[1iyb]] - NgRNase NW <br />
+*RNase P
+**[[3ok7]], [[3okb]], [[3q1q]], [[3q1r]] - TmRNase P + TmRNase P RNA + tRNAPhe <br />
+**[[1nz0]] - TmRNase P  <br />
+**[[1d6t]] - RNase P  - ''Staphylococcus aureus''<br />
+**[[2a64]] - GsRNase P (mutant) <br />
+**[[1a6f]], [[1nbs]], [[2jg4]] - BsRNase P (mutant) <br />
+**[[1ts9]], [[1tsf]] - AfRNase P <br />
+**[[1u9s]] - RNase P - synthetic <br />
+**[[2avs]] - PfRNase P (mutant) - ''Pyrococcus furiosus'' <br />
+**[[2k3r]]. [[2ki7]] - PfRNase P <br />
+**[[2ljp]] - EcRNase P <br />
+**[[2av5]] - PhRNase P component 2<br />
+**[[1x0t]] - PhRNase P component 4<br />
+**[[2zae]] - PhRNase P components 1+4<br />
+**[[2czv]] - PhRNase P component 2 (mutant) +3<br />
+**[[3iab]] - yRNase P subunits POP6+POP7 + RNase MRP P3 domain<br />
+*RNase PH
+**[[3dd6]] - RNase PH - ''Bacillus anthracis''  <br />
+**[[1oyp]], [[1oyr]], [[1oys]] - BsRNase PH <br />
+**[[1r6l]], [[1r6m]] - PaRNase PH - ''Pseudomonas aeruginosa''<br />
+**[[3b4t]] - MtRNase PH <br />
+**[[1udn]] - AaRNase PH <br />
+**[[1udo]], [[1udq]], [[1uds]] - AaRNase PH (mutant)<br />
+*RNase RH
+**[[1bol]] - RNase RH - ''Rhizopus niveus'' <br />
+*RNase S
+**[[3oqy]], [[3oqz]], [[3or0]], [[1z3l]], [[1z3m]], [[1z3p]], [[1y92]], [[1y94]], [[1fev]], [[1d5d]], [[1d5e]], [[1d5h]], [[2rln]], [[1qwq]], [[4n4c]] - bRNase S seminal (mutant) <br />
+**[[1tq9]], [[1r5c]], [[11ba]], [[11bg]] - bRNase S + nucleotide <br />
+**[[1r5d]], [[1r3m]], [[1n1x]], [[1n3z]], [[1j7z]], [[1j80]], [[1j81]], [[1j82]], [[1cjq]], [[1cjr]], [[1bsr]], [[1rbc]], [[1rbd]], [[1rbe]], [[1rbf]], [[1rbg]], [[1rbh]] [[1rbi]], [[1rnu]], [[1rnv]], [[2rns]] - bRNase S  <br />
+**[[1b6v]] - bRNase S/bRNase A <br />
+*RNase S3
+**[[1iqq]] - RNase S3 - Japanese pear <br />
+*RNase SA
+**[[3a5e]], [[1zgx]], [[1ynv]], [[1t2h]], [[1t2i]], [[1uci]], [[1ucj]], [[1uck]], [[1ucl]], [[1i70]], [[1i8v]], [[1box]], [[4gho]] - SaRNase SA guanyl-specific (mutant) - ''Streptomyces aureofaciens'' <br />
+**[[1lni]], [[1c54]], [[1rge]], [[1rgf]], [[1rgg]], [[1rgh]], [[1sar]] - SaRNase SA <br />
+**[[1gmp]], [[1gmq]], [[1gmr]], [[2sar]] - SaRNase SA + nucleotide <br />
+**[[1ay7]] - SaRNase SA + barstar <br />
+**[[1rsn]] - SaRNase SA + cyclophosphothiolate <br />
+**[[1py3]], [[1pyl]] - SaRNase SA2 <br />
+**[[3dgy]], [[3dh2]], [[3d4a]], [[3d5g]], [[3d5i]] - SaRNase SA2 + nucleotide <br />
+**[[1mgr]], [[1mgw]] - SaRNase SA3 <br />
+*RNase SF11
+**[[1ioo]] - RNase SF11 - ''Nicotiana alata'' <br />
+*RNase T
+**[[2is3]] - EcRNase T <br />
+**[[3ngy]] - EcRNase T (mutant)<br />
+**[[3ngz]] - EcRNase T (mutant) + nucleotide<br />
+**[[3ngo]], [[3nh1]], [[3nh2]] - EcRNase T + nucleotide<br />
+**[[3v9s]], [[3v9w]], [[3v9u]], [[3v9x]], [[3v9z]], [[3va0]], [[3va3]], [[4kaz]], [[4kb0]], [[4kb1]] - EcRNase T + DNA<br />
+**[[2f96]] - PaRNase T <br />
+*RNase T1
+**[[1tto]], [[1rn1]], [[1rn4]], [[1rnt]], [[2aad]], [[2aae]] - AoRNase T1 - ''Aspergillus oryzae'' <br />
+**[[1q9e]], [[1iyy]], [[1i2e]], [[1i2f]],  [[1i2g]],  [[1i3f]], [[1i3i]], [[1hz1]], [[1fys]], [[1fzu]], [[1ch0]], [[4bir]], [[3bir]], [[5bir]], [[1g02]], [[1hyf]], [[1trp]], [[1trq]], [[2bir]], [[4rnt]], [[5rnt]], [[6rnt]], [[7rnt]], [[8rnt]], [[9rnt]] - AoRNase T1 (mutant)<br />
+**[[1lov]], [[1low]], [[1loy]], [[1i0v]],  [[1i0x]],  [[1b2m]], [[1rhl]], [[1bir]], [[1rgk]], [[1rgl]] - AoRNase T1 (mutant) + nucleotide<br />
+**[[1bvi]], [[2bu4]], [[2hoh]], [[3hoh]], [[4hoh]], [[5hoh]], [[1gsp]], [[2gsp]]. [[3gsp]], [[4gsp]], [[5gsp]]. [[6gsp]], [[7gsp]], [[1det]], [[1rls]], [[1lra]], [[1rga]], [[1bu4]], [[1rgc]], [[3bu4]], [[4bu4]], [[5bu4]], [[3syu]], [[3urp]] - AoRNase T1 + nucleotide<br />
+**[[3rnt]] - AoRNase T1 + V<br />
+**[[1ygw]] - AoRNase T1 - NMR<br />
+*RNase T2
+**[[3t0o]] - hRNase T2<br />
+*RNase U2
+**[[3agn]], [[3ago]], [[3ahw]] - UsRNase U2 + AMP - ''Ustilago sphaerogena''<br />
+**[[1rtu]] - UsRNase U2<br />
+**[[3ahs]] - UsRNase U2B<br />
+*RNase Z
+**[[2e7y]] - TmRNase Z<br />
+**[[2fk6]], [[4gcw]] - BsRNase Z (mutant) + tRNA Thr<br />
+**[[1y44]] - BsRNase Z (mutant) <br />
+**[[2cbn]] - EcRNase Z<br />
+**[[3v32]], [[3v33]], [[3v34]] - hRNase Z<br />
+*RNase α-sarcin
+**[[1de3]] - AgRNase αs - ''Aspergillus giganteus''<br />
+**[[1r4y]] - AgRNase αs (mutant)<br />
+*Oligoribonuclease
+**[[2igi]], [[1yta]] - EcORNase<br />
+**[[2gbz]] - ORNase - ''Xanthomonas campestris''<br />
+**[[1j9a]] - ORNase - ''Haemophilus influenza''<br />
+**[[3tr8]] - ORNase - ''Coxiella burnetii''<br />
+*Polynucleotide phosphorylase
+**[[3cdi]] - EcPNPase<br />
+**[[3gll]] - EcPNPase core<br />
+**[[3cdj]] - EcPNPase C terminal truncated<br />
+**[[1e3h]], [[1e3p]] - PNPase - ''Streptomyces antibioticus''<br />
+**[[3gcm]], [[3gme]], [[3h1c]] - EcPNPase + RNase E recognition domain<br />
+**[[3h36]] - PNPase fragment - ''Streptomyces mutans''<br />
+*Binase
-**[[2ix0]], [[2id0]] - EcRNase II <br />
+**[[1gou]], [[1gov]], [[1goy]] - BiBinase - ''Bacillus intermedius''<br />
-**[[2ix1]] - EcRNase II (mutant) <br />
+**[[2rbi]], [[4haa]] - BiBinase (mutant)<br />
-**[[1m58]], [[1km8]], [[1km9]]- BuRNase 2 - Bullfrog <br />
+**[[1buj]] - BiBinase - NMR<br />
-**[[1bc4]] - BuRNase 2  - NMR<BR />
-**[[1m07]] - BuRNase 2 + DNA<BR />
-**[[2bex]] - hRNase 2 + RNase inhibitor protein<br />
-**[[2bzz]], [[2c01]], [[2c02]], [[2c05]] - hRNase 2 + inhibitor
+*Poly(A)-specific RNase
+**[[1ug8]] - mParn R3H domain - NMR<br />
+**[[1whv]] - mParn RNA-binding domain - NMR<br />
+**[[2rok]] - mParn CAP-binding domain - NMR<br />
+**[[3d45]] - mParn + nucleotide<br />
+**[[2a1s]] - hParn <br />
+**[[2a1r]], [[3ctr]] - hParn + nucleotide<br />
+*RNase pop2
+**[[4b8a]] - yRNase pop2 + cell division cycle protein 39<br />
+**[[4b8c]] - yRNase pop2 + cell division cycle protein 39 + CCR4<br />
+*Other RNases
+**[[2zpo]] - RNase - ''Chelonia mydas''<br />
+**[[3a4y]], [[3idz]], [[3ie0]], [[3ie2]] - TtRNase  (mutant) - ''Thermus thermophilus''<br />
+**[[3iek]] - TtRNase<br />
+**[[3ie1]], [[3iem]] - TtRNase (mutant)<br />
+**[[3iel]] - TtRNase + nucleotide<br />
 }}
 This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.

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