Template:STRUCTURE 1hfe: Difference between revisions

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{{Structure
{{Structure
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1hfe]], resolution 1.60&Aring; (<scene name='initialview01'>default scene</scene>)}}}
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1hfe]], [[Resolution|resolution]] 1.60&Aring; (<scene name='initialview01'>default scene</scene>)}}}
|LIGAND= <scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=CYN:CYANIDE+ION'>CYN</scene>, <scene name='pdbligand=CYS:CYSTEINE'>CYS</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=PDT:1,3-PROPANEDITHIOL'>PDT</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
|LIGAND= <scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=CYN:CYANIDE+ION'>CYN</scene>, <scene name='pdbligand=CYS:CYSTEINE'>CYS</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=PDT:1,3-PROPANEDITHIOL'>PDT</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin_hydrogenase Ferredoxin hydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.12.7.2 1.12.7.2] </span>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin_hydrogenase Ferredoxin hydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.12.7.2 1.12.7.2] </span>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02256 Fe_hyd_SSU], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00037 Fer4], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02906 Fe_hyd_lg_C], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2768 COG2768]</span>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1hfe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hfe OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1hfe RCSB], [http://www.ebi.ac.uk/pdbsum/1hfe PDBsum]</span>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1hfe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hfe OCA], [http://www.ebi.ac.uk/pdbsum/1hfe PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1hfe RCSB]</span>
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/1hfeL01 1Hfel01], [http://www.cathdb.info/domain/1hfeL03 1Hfel03], [http://www.cathdb.info/domain/1hfeL02 1Hfel02], [http://www.cathdb.info/domain/1hfeM01 1Hfem01], [http://www.cathdb.info/domain/1hfeM03 1Hfem03], [http://www.cathdb.info/domain/1hfeM02 1Hfem02], [http://www.cathdb.info/domain/1hfeS00 1Hfes00], [http://www.cathdb.info/domain/1hfeT00 1Hfet00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017900 Ipr017900], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004108 Ipr004108], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017896 Ipr017896], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013352 Ipr013352], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009016 Ipr009016], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006311 Ipr006311], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008953 Ipr008953], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003149 Ipr003149], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017909 Ipr017909]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00037 PF00037], [http://pfam.sanger.ac.uk/family?acc=PF02906 PF02906], [http://pfam.sanger.ac.uk/family?acc=PF02256 PF02256]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=36018 d1hfel1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39001 d1hfel2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39002 d1hfem2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=36019 d1hfem1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=19640 d1hfes_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=19641 d1hfet_]<br>UniProt : [http://www.uniprot.org/uniprot/P07598 P07598], [http://www.uniprot.org/uniprot/P07603 P07603]</span>
|FUNCTION={{GO|id=GO:0051539 | text = 4 iron, 4 sulfur cluster binding}}{{GO|id=GO:0008901 | text = ferredoxin hydrogenase activity}}{{GO|id=GO:0051536 | text = iron-sulfur cluster binding}}{{GO|id=GO:0009055 | text = electron carrier activity}}{{GO|id=GO:0016491 | text = oxidoreductase activity}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0005506 | text = iron ion binding}}
|uPDB=1HFE|CONSURF={{!}}-
|PROCESS={{GO|id=GO:0006810 | text = transport}}{{GO|id=GO:0006118 | text = electron transport}}
|COMPONENT={{GO|id=GO:0042597 | text = periplasmic space}}
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeL03 1Hfel03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeL01 1Hfel01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeL02 1Hfel02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeM01 1Hfem01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeM03 1Hfem03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeM02 1Hfem02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeS00 1Hfes00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeT00 1Hfet00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009016 Ipr009016], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013352 Ipr013352], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004108 Ipr004108], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001450 Ipr001450], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003149 Ipr003149], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006311 Ipr006311], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008953 Ipr008953]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF02906 PF02906], [http://pfam.sanger.ac.uk/family?acc=PF00037 PF00037], [http://pfam.sanger.ac.uk/family?acc=PF02256 PF02256]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=36018 d1hfel1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39001 d1hfel2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39002 d1hfem2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=36019 d1hfem1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=19640 d1hfes_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=19641 d1hfet_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P07598 P07598], [http://ca.expasy.org/cgi-bin/niceprot.pl?P07603 P07603]</span>
|CONSURF={{!}}-
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
Line 18: Line 14:
<jmolButton>
<jmolButton>
<script></script>
<script></script>
<text>A [x]</text>
<text>S [x]</text>
<name>jmb_1hfe_A</name>
<name>jmb_1hfe_S</name>
<title>toggle chain A</title>
<title>toggle chain S</title>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
Line 28: Line 24:
<jmolButton>
<jmolButton>
<script></script>
<script></script>
<text>C [x]</text>
<text>T [x]</text>
<name>jmb_1hfe_C</name>
<name>jmb_1hfe_T</name>
<title>toggle chain C</title>
<title>toggle chain T</title>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
Line 39: Line 35:
<jmolButton>
<jmolButton>
<script></script>
<script></script>
<text>B [x]</text>
<text>L [x]</text>
<name>jmb_1hfe_B</name>
<name>jmb_1hfe_L</name>
<title>toggle chain B</title>
<title>toggle chain L</title>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
Line 49: Line 45:
<jmolButton>
<jmolButton>
<script></script>
<script></script>
<text>D [x]</text>
<text>M [x]</text>
<name>jmb_1hfe_D</name>
<name>jmb_1hfe_M</name>
<title>toggle chain D</title>
<title>toggle chain M</title>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>

Latest revision as of 14:14, 11 March 2013

Drag the structure with the mouse to rotate
1hfe, resolution 1.60Å ()
Ligands: , , , , , ,
Activity: Ferredoxin hydrogenase, with EC number 1.12.7.2
Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


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