Template:STRUCTURE 1lvc: Difference between revisions

(5 intermediate revisions by the same user not shown)

Line 1:

{{Structure

|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1lvc, resolution 3.60Å (<scene name='initialview01'>~~initial~~ scene</scene>)

|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1lvc]], [[Resolution|resolution]] 3.60Å (<scene name='initialview01'>default scene</scene>)}}}

~~|SITE=~~

|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DOT:3ANTHRANILOYL-2-DEOXY-ADENOSINE-5-TRIPHOSPHATE'>DOT</scene>, <scene name='pdbligand=YB:YTTERBIUM+(III)+ION'>YB</scene>

|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DOT:~~3'ANTHRANILOYL~~-2~~'~~-DEOXY-ADENOSINE-5~~'~~-TRIPHOSPHATE'>DOT</scene>, <scene name='pdbligand=YB:YTTERBIUM+(III)+ION'>YB</scene>

|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenylate_cyclase Adenylate cyclase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.6.1.1 4.6.1.1] </span>

~~|GENE=~~

|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam03497 Anthrax_toxA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00051 EFh], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG5126 FRQ1]</span>

|RELATEDENTRY=[[1k90|1k90]]

|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lvc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lvc OCA], [http://www.ebi.ac.uk/pdbsum/1lvc PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1lvc RCSB]</span>

|FUNCTION={{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0005524 | text = ATP binding}}{{GO|id=GO:0004016 | text = adenylate cyclase activity}}{{GO|id=GO:0003824 | text = catalytic activity}}{{GO|id=GO:0016829 | text = lyase activity}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0000287 | text = magnesium ion binding}}{{GO|id=GO:0008294 | text = calcium- and calmodulin-responsive adenylate cyclase activity}}{{GO|id=GO:0005509 | text = calcium ion binding}}{{GO|id=GO:0005516 | text = calmodulin binding}}{{GO|id=GO:0000166 | text = nucleotide binding}}

|PROCESS={{GO|id=GO:0009405 | text = pathogenesis}}{{GO|id=GO:0006171 | text = cAMP biosynthetic process}}

|COMPONENT={{GO|id=GO:0005576 | text = extracellular region}}

|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lvcD01 1Lvcd01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lvcD02 1Lvcd02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lvcE01 1Lvce01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lvcE02 1Lvce02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lvcF02 1Lvcf02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lvcF01 1Lvcf01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014781 Ipr014781], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005165 Ipr005165], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003541 Ipr003541]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03497 PF03497]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78236 d1lvca_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78237 d1lvcb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78238 d1lvcc_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P40136 P40136], [http://ca.expasy.org/cgi-bin/niceprot.pl?P62158 P62158]</span>

|uPDB=1LVC|CONSURF={{!}}-

{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]

{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"

{{!}} '''Toggle Conservation Colors:'''

{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}

Rows = identical sequences:

<jmol>

<title>toggle chain A</title>