Sandbox Reserved 560: Difference between revisions

Latest revision as of 20:49, 24 May 2012

This Sandbox is Reserved from 05/22/2012, through 07/22/2012 for use in the course "BIOL 414" taught by Greg Buhrman at the North Carolina State University, Raleigh, NC USA. This reservation includes Sandbox Reserved 551 through Sandbox Reserved 590.

To get started:

Click the edit this page tab at the top. Save the page after each step, then edit it again.
Click the 3D button (when editing, above the wikitext box) to insert Jmol.
show the Scene authoring tools, create a molecular scene, and save it. Copy the green link into the page.
Add a description of your scene. Use the buttons above the wikitext box for bold, italics, links, headlines, etc.

More help: Help:Editing

Hi Michael, Here is your very own Proteopedia Page to play with for pdb code: 2V89. Your presentation date is: June 6. Have Fun!

Greg Buhrman

2v89, resolution 1.10Å ()

Ligands:

Non-Standard Residues:

Related:

2v86, 2v87, 2a23, 2v83, 2v85, 2v88

Structural annotation:
Resources:	InterPro : Ipr025162, Ipr011043, Ipr015915, Ipr004321 Pfam : PF03089 SCOP : d2v89a1, d2v89b1

Evolutionary conservation:

Toggle Conservation Colors:

Rows = identical sequences:

Further Information:

Caveats,

Explanation,
Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, RCSB, PDBsum

Coordinates:

save as pdb, mmCIF, xml

CRYSTAL STRUCTURE OF RAG2-PHD FINGER IN COMPLEX WITH H3K4ME3 PEPTIDE AT 1.1A RESOLUTIONCRYSTAL STRUCTURE OF RAG2-PHD FINGER IN COMPLEX WITH H3K4ME3 PEPTIDE AT 1.1A RESOLUTION

About this StructureAbout this Structure

2V89 is a 4 chains structure of sequences from Mus musculus. Full crystallographic information is available from OCA.

ReferenceReference

^{[xtra 1]}

↑ Ramon-Maiques S, Kuo AJ, Carney D, Matthews AG, Oettinger MA, Gozani O, Yang W. The plant homeodomain finger of RAG2 recognizes histone H3 methylated at both lysine-4 and arginine-2. Proc Natl Acad Sci U S A. 2007 Nov 27;104(48):18993-8. Epub 2007 Nov 19. PMID:18025461

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA, Greg Buhrman

[1] Ramon-Maiques S, Kuo AJ, Carney D, Matthews AG, Oettinger MA, Gozani O, Yang W. The plant homeodomain finger of RAG2 recognizes histone H3 methylated at both lysine-4 and arginine-2. Proc Natl Acad Sci U S A. 2007 Nov 27;104(48):18993-8. Epub 2007 Nov 19. PMID:18025461

[xtra 1]

@@ Line 2: / Line 2: @@
 {{NCSU_BIOL414_Sandbox}}
 <!-- PLEASE ADD YOUR CONTENT BELOW HERE -->
-Hi everyone,
+Hi Michael,
-Here is your very own Proteopedia Page to play with.
+Here is your very own Proteopedia Page to play with for pdb code: 2V89.
-This page is not publicly available yet,
+Your presentation date is: June 6.
-so don't worry about making mistakes that
-other people will see.
 Have Fun!
 Greg Buhrman
+[[Image:2v89.png|left|200px]]
+<!--
+The line below this paragraph, containing "STRUCTURE_2v89", creates the "Structure Box" on the page.
+You may change the PDB parameter (which sets the PDB file loaded into the applet)
+or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+or leave the SCENE parameter empty for the default display.
+-->
+{{STRUCTURE_2v89|  PDB=2v89  |  SCENE=  }}
+===CRYSTAL STRUCTURE OF RAG2-PHD FINGER IN COMPLEX WITH H3K4ME3 PEPTIDE AT 1.1A RESOLUTION===
+==About this Structure==
+V89 is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V89 OCA].
+==Reference==
+<ref group="xtra">PMID:18025461</ref><references group="xtra"/>
+[[Category: Mus musculus]]
+[[Category: Ramon-Maiques, S.]]
+[[Category: Yang, W.]]
+[[Category: Covalent modification]]
+[[Category: Dna recombination]]
+[[Category: Dna-binding]]