View source for 3fd3


==Structure of the C-terminal domains of a LysR family protein from Agrobacterium tumefaciens str. C58.==
<StructureSection load='3fd3' size='340' side='right'caption='[[3fd3]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[3fd3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FD3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FD3 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=P33:3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL'>P33</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AGR_C_1691, Atu0928, oriC ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fd3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fd3 OCA], [https://pdbe.org/3fd3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fd3 RCSB], [https://www.ebi.ac.uk/pdbsum/3fd3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fd3 ProSAT], [https://www.topsan.org/Proteins/MCSG/3fd3 TOPSAN]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fd/3fd3_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fd3 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Agrfc]]
[[Category: Large Structures]]
[[Category: Cuff, M E]]
[[Category: Edwards, A]]
[[Category: Joachimiak, A]]
[[Category: Structural genomic]]
[[Category: Savchenko, A]]
[[Category: Xu, X]]
[[Category: Zeng, H]]
[[Category: Agrobacterium tumefacien]]
[[Category: Dna-binding]]
[[Category: Lysr]]
[[Category: Mcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transcription regulator]]