View source for 3af5


==The crystal structure of an archaeal CPSF subunit, PH1404 from Pyrococcus horikoshii==
<StructureSection load='3af5' size='340' side='right' caption='[[3af5]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[3af5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AF5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3AF5 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3af6|3af6]]</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PH1404 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=70601 Pyrococcus horikoshii])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3af5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3af5 OCA], [http://pdbe.org/3af5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3af5 RCSB], [http://www.ebi.ac.uk/pdbsum/3af5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3af5 ProSAT]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/af/3af5_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3af5 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Pyrococcus horikoshii]]
[[Category: Ishikawa, H]]
[[Category: Kuramitsu, S]]
[[Category: Masui, R]]
[[Category: Nakagawa, N]]
[[Category: Nishida, Y]]
[[Category: Archaea]]
[[Category: Archaeal cpsf]]
[[Category: Beta-casp family]]
[[Category: Hydrolase]]
[[Category: Kh domain]]
[[Category: Metallo-beta-lactamase superfamily]]
[[Category: Ribonuclease]]