View source for 5d6e


==Structure of human methionine aminopeptidase 2 with covalent spiroepoxytriazole inhibitor (-)-31b==
<StructureSection load='5d6e' size='340' side='right' caption='[[5d6e]], [[Resolution|resolution]] 1.49&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[5d6e]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5D6E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5D6E FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=94A:(4R,7S)-7-HYDROXY-1-(4-METHOXYBENZYL)-7-METHYL-4,5,6,7-TETRAHYDRO-1H-BENZOTRIAZOL-4-YL+PROPAN-2-YLCARBAMATE'>94A</scene>, <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=TBU:TERTIARY-BUTYL+ALCOHOL'>TBU</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methionyl_aminopeptidase Methionyl aminopeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.11.18 3.4.11.18] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5d6e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5d6e OCA], [http://pdbe.org/5d6e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5d6e RCSB], [http://www.ebi.ac.uk/pdbsum/5d6e PDBsum]</span></td></tr>
</table>
== Function ==
[[http://www.uniprot.org/uniprot/MAP2_HUMAN MAP2_HUMAN]] Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). The catalytic activity of human METAP2 toward Met-Val peptides is consistently two orders of magnitude higher than that of METAP1, suggesting that it is responsible for processing proteins containing N-terminal Met-Val and Met-Thr sequences in vivo.  Protects eukaryotic initiation factor EIF2S1 from translation-inhibiting phosphorylation by inhibitory kinases such as EIF2AK2/PKR and EIF2AK1/HCR. Plays a critical role in the regulation of protein synthesis. 
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== Publication Abstract from PubMed ==
Methionine aminopeptidases (MetAPs) are responsible for the co-translational cleavage of initiator methionines from nascent proteins. The MetAP2 subtype is up-regulated in many cancers, and selective inhibition of MetAP2 suppresses both vascularization and growth of tumors in animal models. The natural product fumagillin is a selective and potent irreversible inhibitor of MetAP2, and semi-synthetic derivatives of fumagillin have shown promise in clinical studies for the treatment of cancer, and, more recently, for obesity. Further development of fumagillin derivatives has been complicated, however, by their generally poor pharmacokinetics. In an attempt to overcome these limitations, we developed an easily diversifiable synthesis of a novel class of MetAP2 inhibitors that were designed to mimic fumagillin's molecular scaffold but have improved pharmacological profiles. These substances were found to be potent and selective inhibitors of MetAP2, as demonstrated in biochemical enzymatic assays against three MetAP isoforms. Inhibitors with the same relative and absolute stereoconfiguration as fumagillin displayed significantly higher activity than their diastereomeric and enantiomeric isomers. X-ray crystallographic analysis revealed that the inhibitors covalently modify His231 in the MetAP2 active site via ring-opening of a spiroepoxide. Biochemically active substances inhibited the growth of endothelial cells and a MetAP2-sensitive cancer cell line, while closely related inactive isomers had little effect on the proliferation of either cell type. These effects correlated with altered N-terminal processing of the protein 14-3-3-gamma. Finally, selected substances were found to have improved stabilities in mouse plasma and microsomes relative to the clinically-investigated fumagillin derivative beloranib.

Spiroepoxytriazoles are Fumagillin-like Irreversible Inhibitors of MetAP2 with Potent Cellular Activitygamma.,Morgen M, Jost C, Malz M, Janowski R, Niessing D, Klein CD, Gunkel N, Miller AK ACS Chem Biol. 2015 Dec 19. PMID:26686773<ref>PMID:26686773</ref>

From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 5d6e" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Methionyl aminopeptidase]]
[[Category: Janowski, R]]
[[Category: Miller, A K]]
[[Category: Niessing, D]]
[[Category: Hydrolase]]
[[Category: Inhibitor]]
[[Category: Methionine aminopeptidase 2]]
[[Category: Spiroepoxytriazole]]