Proteopedia

User:Jaime Prilusky/Sandbox BU

< User:Jaime Prilusky

Testing the Protein Assemblies generated on our server on demand with PISA software.

In order to load and display a structure, the value for the load= parameter determines what it will be shown. For some structures like 1stp, PISA calculates more than one possible Assembly.

  • load='2ace' displays the default PDB structure
  • load='2ace/1' displays the first Assembly calculated by PISA
  • load='2ace/n' displays the n Assembly calculated by PISA


2ace

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2ace/1

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1stp

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1stp/1

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1stp/2

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1stp/3

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1at9

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1at9/1

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1zgc

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1zgc/1

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1y7w

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1y7w/1

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[xtra 1]

  1. ↑ Krissinel E, Henrick K. Inference of macromolecular assemblies from crystalline state. J Mol Biol. 2007 Sep 21;372(3):774-97. Epub 2007 May 13. PMID:17681537 doi:10.1016/j.jmb.2007.05.022
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