Cryo-EM structure of human BKca channel-compound 51b complexCryo-EM structure of human BKca channel-compound 51b complex

Structural highlights

9jo4 is a 4 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Electron Microscopy, Resolution 3.4Å
Ligands:, , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

KCMA1_HUMAN

Publication Abstract from PubMed

The BK(Ca) channel, a large-conductance calcium-activated potassium channel, plays a crucial role in maintaining the homeostasis of the micturition cycle and airway-related functions. In this study, we optimized a novel BK(Ca) channel activator, 4d, with a diphenyl ether structure identified from library screening. This led to the discovery of potent activators, 10b (EC(50) = 0.12 muM, cell-based assay) and 51b, an orally bioavailable derivative. Compound 10b demonstrated potent in vivo efficacy in a spontaneous hypertensive rat (SHR) of urinary incontinence model, while compound 51b showed dose-dependent cough suppression efficacy with an ED(50) of 11.8 mg/kg in a citric acid-induced cough model. Furthermore, we reported the cryo-electron microscopy (cryo-EM) structures of the BK(Ca) channel in complex with 10b and 51b at resolutions of 2.8 and 3.4 A. Based on structural analyses, we determined the binding sites and key interaction residues of 51b, which were validated via mutation studies.

Discovery of Diphenyl Ether Derivatives as Novel BK(Ca) Channel Activators: Structure-Activity Relationship, Cryo-EM Complex Structures, and In Vivo Animal Studies.,Park SB, Lee NY, Lee EY, Kim S, Lee N, Roh EC, Kim YG, Kim HJ, Jin MS, Park CS, Kim YC J Med Chem. 2025 Feb 13. doi: 10.1021/acs.jmedchem.4c02008. PMID:39947888[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Park SB, Lee NY, Lee EY, Kim S, Lee N, Roh EC, Kim YG, Kim HJ, Jin MS, Park CS, Kim YC. Discovery of Diphenyl Ether Derivatives as Novel BK(Ca) Channel Activators: Structure-Activity Relationship, Cryo-EM Complex Structures, and In Vivo Animal Studies. J Med Chem. 2025 Feb 27;68(4):4259-4286. PMID:39947888 doi:10.1021/acs.jmedchem.4c02008

9jo4, resolution 3.40Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA