Crystal structure of the Coenzyme F420-dependent sulfite reductase from Methanocaldococcus jannaschii at 2.3-A resolutionCrystal structure of the Coenzyme F420-dependent sulfite reductase from Methanocaldococcus jannaschii at 2.3-A resolution

Structural highlights

7np8 is a 4 chain structure with sequence from Methanocaldococcus jannaschii DSM 2661. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.3Å
Ligands:, , , , , , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

FSR_METJA Catalyzes the reduction of sulfite to sulfide using reduced F420 as the electron source. Involved in sulfite detoxification and assimilation. Cannot use NADH or NADPH.[1] [2]

Publication Abstract from PubMed

Methanogenic archaea are main actors in the carbon cycle but are sensitive to reactive sulfite. Some methanogens use a sulfite detoxification system that combines an F(420)H(2)-oxidase with a sulfite reductase, both of which are proposed precursors of modern enzymes. Here, we present snapshots of this coupled system, named coenzyme F(420)-dependent sulfite reductase (Group I Fsr), obtained from two marine methanogens. Fsr organizes as a homotetramer, harboring an intertwined six-[4Fe-4S] cluster relay characterized by spectroscopy. The wire, spanning 5.4 nm, electronically connects the flavin to the siroheme center. Despite a structural architecture similar to dissimilatory sulfite reductases, Fsr shows a siroheme coordination and a reaction mechanism identical to assimilatory sulfite reductases. Accordingly, the reaction of Fsr is unidirectional, reducing sulfite or nitrite with F(420)H(2). Our results provide structural insights into this unique fusion, in which a primitive sulfite reductase turns a poison into an elementary block of life.

Structures of the sulfite detoxifying F(420)-dependent enzyme from Methanococcales.,Jespersen M, Pierik AJ, Wagner T Nat Chem Biol. 2023 Jan 19. doi: 10.1038/s41589-022-01232-y. PMID:36658338[3]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Johnson EF, Mukhopadhyay B. A new type of sulfite reductase, a novel coenzyme F420-dependent enzyme, from the methanarchaeon Methanocaldococcus jannaschii. J Biol Chem. 2005 Nov 18;280(46):38776-86. PMID:16048999 doi:10.1074/jbc.M503492200
  2. Johnson EF, Mukhopadhyay B. Coenzyme F420-dependent sulfite reductase-enabled sulfite detoxification and use of sulfite as a sole sulfur source by Methanococcus maripaludis. Appl Environ Microbiol. 2008 Jun;74(11):3591-5. PMID:18378657 doi:10.1128/AEM.00098-08
  3. Jespersen M, Pierik AJ, Wagner T. Structures of the sulfite detoxifying F(420)-dependent enzyme from Methanococcales. Nat Chem Biol. 2023 Jan 19. PMID:36658338 doi:10.1038/s41589-022-01232-y

7np8, resolution 2.30Å

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