Crystal Structure of Native Ps01740Crystal Structure of Native Ps01740

Structural highlights

5uif is a 3 chain structure with sequence from Pseudomonas sp. UW4. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.57Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

K9NIA5_9PSED

Publication Abstract from PubMed

A Pseudomonas sp. UW4 protein (UniProt K9NIA5) of unknown function was identified as similar to 4-oxalocrotonate tautomerase (4-OT)-like and cis-3-chloroacrylic acid dehalogenase (cis-CaaD)-like subgroups of the tautomerase superfamily (TSF). This protein lacks only Tyr-103 of the amino acids critical for cis-CaaD activity (Pro-1, His-28, Arg-70, Arg-73, Tyr-103, Glu-114). As it may represent an important variant of these enzymes, its kinetic and structural properties have been determined. The protein shows tautomerase activity with phenylenolpyruvate, but lacks native 4-OT activity and dehalogenase activity with the isomers of 3-chloroacrylic acid. It shows mostly low-level hydratase activity at pH 7.0, converting 2-oxo-3-pentynoate to acetopyruvate, consistent with cis-CaaD-like behavior. At pH 9.0, this compound results primarily in covalent modification of Pro-1, which is consistent with 4-OT-like behavior. These observations could reflect a pKa for Pro-1 that is closer to that of cis-CaaD ( approximately 9.2) than to 4-OT ( approximately 6.4). A structure of the native enzyme, at 2.6 A resolution, highlights differences at the active site from those of 4-OT and cis-CaaD that add to our understanding of how contemporary TSF reactions and mechanisms may have diverged from a common 4-OT-like ancestor.

Kinetic and structural characterization of a cis-3-Chloroacrylic acid dehalogenase homologue in Pseudomonas sp. UW4: A potential step between subgroups in the tautomerase superfamily.,LeVieux JA, Baas BJ, Kaoud TS, Davidson R, Babbitt PC, Zhang YJ, Whitman CP Arch Biochem Biophys. 2017 Dec 15;636:50-56. doi: 10.1016/j.abb.2017.10.018. Epub, 2017 Oct 27. PMID:29111295[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. LeVieux JA, Baas BJ, Kaoud TS, Davidson R, Babbitt PC, Zhang YJ, Whitman CP. Kinetic and structural characterization of a cis-3-Chloroacrylic acid dehalogenase homologue in Pseudomonas sp. UW4: A potential step between subgroups in the tautomerase superfamily. Arch Biochem Biophys. 2017 Dec 15;636:50-56. doi: 10.1016/j.abb.2017.10.018. Epub, 2017 Oct 27. PMID:29111295 doi:http://dx.doi.org/10.1016/j.abb.2017.10.018

5uif, resolution 2.57Å

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