Crystal structure of cyclophilin AquaCyp293 from Hirschia balticaCrystal structure of cyclophilin AquaCyp293 from Hirschia baltica

Structural highlights

5ex2 is a 2 chain structure with sequence from Hirschia baltica ATCC 49814. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.294Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

C6XJ17_HIRBI

Publication Abstract from PubMed

Cyclophilins are ubiquitous cis-trans-prolyl isomerases (PPIases) found in all kingdoms of life. Here, we identify a novel family of cyclophilins, termed AquaCyps, which specifically occurs in marine Alphaproteobacteria, but not in related terrestric species. In addition to a canonical PPIase domain, AquaCyps contain large extensions and insertions. The crystal structures of two representatives from Hirschia baltica, AquaCyp293 and AquaCyp300, reveal the formation of a compact domain, the NIC domain, by the N- and C-terminal extensions together with a central insertion. The NIC domain adopts a novel mixed alpha-helical, beta-sheet fold that is linked to the cyclophilin domain via a conserved disulfide bond. In its overall fold, AquaCyp293 resembles AquaCyp300, but the two proteins utilize distinct sets of active site residues, consistent with differences in their PPIase catalytic properties. While AquaCyp293 is a highly active general PPIase, AquaCyp300 is specific for hydrophobic substrate peptides and exhibits lower overall activity.

Structural and Functional Characterization of a Novel Family of Cyclophilins, the AquaCyps.,Jakob RP, Schmidpeter PA, Koch JR, Schmid FX, Maier T PLoS One. 2016 Jun 8;11(6):e0157070. doi: 10.1371/journal.pone.0157070., eCollection 2016. PMID:27276069[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Jakob RP, Schmidpeter PA, Koch JR, Schmid FX, Maier T. Structural and Functional Characterization of a Novel Family of Cyclophilins, the AquaCyps. PLoS One. 2016 Jun 8;11(6):e0157070. doi: 10.1371/journal.pone.0157070., eCollection 2016. PMID:27276069 doi:http://dx.doi.org/10.1371/journal.pone.0157070

5ex2, resolution 1.29Å

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