N-terminal dimerization domain of H-NS in complex with Hha (Salmonella Typhimurium)N-terminal dimerization domain of H-NS in complex with Hha (Salmonella Typhimurium)

Structural highlights

4icg is a 4 chain structure with sequence from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.9217Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

HNS_SALTY H-NS binds tightly to ds-DNA, increases its thermal stability and inhibits transcription. It also binds to ss-DNA and RNA but with a much lower affinity. H-NS has possible histone-like function. May be a global transcriptional regulator through its ability to bind to curved DNA sequences, which are found in regions upstream of a certain subset of promoters. It plays a role in the thermal control of pili production. It is subject to transcriptional auto-repression. It binds preferentially to the upstream region of its own gene recognizing two segments of DNA on both sides of a bend centered around -150 (By similarity).

Publication Abstract from PubMed

The bacterial nucleoid associated proteins Hha and H-NS jointly repress horizontally acquired genes in Salmonella, including essential virulence loci encoded within Salmonella pathogenicity islands. Hha is known to interact with the N-terminal dimerization domain of H-NS, however the manner in which this interaction enhances transcriptional silencing is not understood. To further understand this process we solved the X-ray crystal structure of Hha in complex with the N-terminal dimerization domain of H-NS (H-NS1-46) to 3.2 A resolution. Two monomers of Hha bind to symmetrical sites on either side of the H-NS1-46 dimer. Disruption of the Hha/H-NS interaction by the H-NS site-specific mutation I11A, results in increased expression of the Hha/H-NS co-regulated gene hilA without affecting the expression levels of proV, a target gene repressed by H-NS in an Hha-independent fashion. Examination of the structure revealed a cluster of conserved basic amino acids that protrude from the surface of Hha on the opposite side of the Hha/H-NS1-46 interface. Hha mutants with a diminished positively charged surface maintain the ability to interact with H-NS but can no longer regulate hilA. Increased expression of the hilA locus did not correspond to significant depletion of H-NS at the promoter region in chromatin immunoprecipitation assays. However in vitro, we find Hha improves H-NS binding to target DNA fragments. Taken together, our results show for the first time how Hha and H-NS interact to direct transcriptional repression and reveal that a positively charged surface of Hha enhances the silencing activity of H-NS nucleoprotein filaments.

Structural Insights into the Regulation of Foreign Genes in Salmonella by the Hha/H-NS Complex.,Ali SS, Whitney JC, Stevenson J, Robinson H, Howell PL, Navarre WW J Biol Chem. 2013 Mar 20. PMID:23515315[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Ali SS, Whitney JC, Stevenson J, Robinson H, Howell PL, Navarre WW. Structural Insights into the Regulation of Foreign Genes in Salmonella by the Hha/H-NS Complex. J Biol Chem. 2013 Mar 20. PMID:23515315 doi:10.1074/jbc.M113.455378

4icg, resolution 2.92Å

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